Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3550W4VSN7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Gm15378-201ENSMUST00000121894 207 ntBASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Gm43183-201ENSMUST00000200632 547 ntBASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Gm4974-201ENSMUST00000209974 875 ntBASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3550W4VSN7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Gm3550W4VSN7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Gm20760-201ENSMUST00000179197 648 ntBASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3550W4VSN7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.38□□□□□ -0.11
Gm3550W4VSN7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gm10653-202ENSMUST00000139570 835 ntBASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gm3550W4VSN7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Gm3550W4VSN7 Gm10517-202ENSMUST00000192970 758 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms