Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H2afb2S4R1M3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H2afb2S4R1M3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Mir5122-201ENSMUST00000175004 89 ntBASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2afb2S4R1M3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Gm7791-201ENSMUST00000219066 539 ntBASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2afb2S4R1M3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H2afb2S4R1M3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
H2afb2S4R1M3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H2afb2S4R1M3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms