Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Gm12382-201ENSMUST00000122005 922 ntBASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Gm42545-201ENSMUST00000202755 922 ntBASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
H2afb3S4R1G7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
H2afb3S4R1G7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Gm12441-201ENSMUST00000121806 588 ntBASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Gm27275-201ENSMUST00000184318 272 ntBASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
H2afb3S4R1G7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Gm20049-201ENSMUST00000219950 730 ntBASIC15.25■□□□□ 0.03
H2afb3S4R1G7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H2afb3S4R1G7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H2afb3S4R1G7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
H2afb3S4R1G7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
H2afb3S4R1G7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms