Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.65■□□□□ 0.26
Atp6v1c1Q9Z1G3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atp6v1c1Q9Z1G3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm22325-201ENSMUST00000158904 308 ntBASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atp6v1c1Q9Z1G3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atp6v1c1Q9Z1G3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atp6v1c1Q9Z1G3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms