Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Mir5122-201ENSMUST00000175004 89 ntBASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Gm38027-201ENSMUST00000192315 235 ntBASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ClcnkaQ9WUB7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ClcnkaQ9WUB7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
ClcnkaQ9WUB7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ClcnkaQ9WUB7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ClcnkaQ9WUB7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ClcnkaQ9WUB7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.58■□□□□ 0.08
ClcnkaQ9WUB7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ClcnkaQ9WUB7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClcnkaQ9WUB7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
ClcnkaQ9WUB7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms