Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx6Q9R1R0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Lhx6Q9R1R0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.93■□□□□ 0.14
Lhx6Q9R1R0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Fst-202ENSMUST00000223640 2612 ntBASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lhx6Q9R1R0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 AC153961.1-201ENSMUST00000217760 385 ntBASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lhx6Q9R1R0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Gm11452-201ENSMUST00000122376 690 ntBASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lhx6Q9R1R0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Lhx6Q9R1R0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 AC125117.2-201ENSMUST00000228344 1140 ntBASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Lhx6Q9R1R0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Gm11355-201ENSMUST00000121120 306 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Gm8000-201ENSMUST00000188378 592 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Lhx6Q9R1R0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lhx6Q9R1R0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms