Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RpgrQ9R0X5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RpgrQ9R0X5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RpgrQ9R0X5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RpgrQ9R0X5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RpgrQ9R0X5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Gm42545-201ENSMUST00000202755 922 ntBASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RpgrQ9R0X5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RpgrQ9R0X5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms