Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nubp2Q9R061 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Nubp2Q9R061 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.04■□□□□ -0
Nubp2Q9R061 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Gm21814-202ENSMUST00000203277 873 ntBASIC15.04■□□□□ -0
Nubp2Q9R061 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Timm23-208ENSMUST00000226683 750 ntBASIC15.04■□□□□ -0
Nubp2Q9R061 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nubp2Q9R061 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.04■□□□□ -0
Nubp2Q9R061 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nubp2Q9R061 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nubp2Q9R061 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Nubp2Q9R061 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.03■□□□□ -0
Nubp2Q9R061 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nubp2Q9R061 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nubp2Q9R061 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nubp2Q9R061 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.03■□□□□ -0
Nubp2Q9R061 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.03■□□□□ -0
Nubp2Q9R061 Gm29791-202ENSMUST00000207888 369 ntBASIC15.03■□□□□ -0
Nubp2Q9R061 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.03■□□□□ -0
Nubp2Q9R061 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.03■□□□□ -0
Nubp2Q9R061 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nubp2Q9R061 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nubp2Q9R061 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nubp2Q9R061 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nubp2Q9R061 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Nubp2Q9R061 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.02■□□□□ -0
Nubp2Q9R061 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nubp2Q9R061 Odf3b-204ENSMUST00000227834 930 ntBASIC15.02■□□□□ -0
Nubp2Q9R061 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nubp2Q9R061 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Gm10418-201ENSMUST00000100943 576 ntBASIC15.01□□□□□ -0.01
Nubp2Q9R061 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.01□□□□□ -0.01
Nubp2Q9R061 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms