Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim44Q9QXA7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim44Q9QXA7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim44Q9QXA7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim44Q9QXA7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim44Q9QXA7 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.67■□□□□ 0.74
Trim44Q9QXA7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms