Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Gm28745-201ENSMUST00000190069 305 ntBASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh5Q9QUM7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm43377-201ENSMUST00000201640 455 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Msh5Q9QUM7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh5Q9QUM7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Msh5Q9QUM7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Msh5Q9QUM7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Gm12813-201ENSMUST00000119615 902 ntBASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh5Q9QUM7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms