Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ppp1r3fQ9JIG4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ppp1r3fQ9JIG4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Il3ra-202ENSMUST00000223589 738 ntBASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm18669-201ENSMUST00000216049 778 ntBASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ppp1r3fQ9JIG4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm27000-201ENSMUST00000182943 842 ntBASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm43514-201ENSMUST00000198852 424 ntBASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ppp1r3fQ9JIG4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ppp1r3fQ9JIG4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3fQ9JIG4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms