Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc17Q9ESX4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc17Q9ESX4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc17Q9ESX4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Zcchc17Q9ESX4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Rps4l-201ENSMUST00000071745 943 ntBASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc17Q9ESX4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc17Q9ESX4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Zcchc17Q9ESX4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Zcchc17Q9ESX4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Zcchc17Q9ESX4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm11452-201ENSMUST00000122376 690 ntBASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm18206-201ENSMUST00000207027 926 ntBASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc17Q9ESX4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc17Q9ESX4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Gm13186-201ENSMUST00000118031 316 ntBASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc17Q9ESX4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms