Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ube4bQ9ES00 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ube4bQ9ES00 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ube4bQ9ES00 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Gm13234-201ENSMUST00000120010 747 ntBASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ube4bQ9ES00 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Gm10493-201ENSMUST00000097270 612 ntBASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ube4bQ9ES00 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ube4bQ9ES00 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms