Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.59■□□□□ 0.25
Rrp8Q9DB85 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rrp8Q9DB85 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rrp8Q9DB85 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rrp8Q9DB85 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rrp8Q9DB85 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rrp8Q9DB85 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rrp8Q9DB85 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Gm13186-201ENSMUST00000118031 316 ntBASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Gm13884-201ENSMUST00000118103 829 ntBASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rrp8Q9DB85 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rrp8Q9DB85 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms