Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Gm7889-201ENSMUST00000185591 958 ntBASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2aQ9DB34 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.71■□□□□ 0.42
Chmp2aQ9DB34 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Chmp2aQ9DB34 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Chmp2aQ9DB34 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2aQ9DB34 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Gm17661-201ENSMUST00000170317 270 ntBASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2aQ9DB34 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp2aQ9DB34 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Gm9987-201ENSMUST00000069768 567 ntBASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp2aQ9DB34 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms