Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ssmem1Q9D9Y8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssmem1Q9D9Y8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssmem1Q9D9Y8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssmem1Q9D9Y8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Gm22697-201ENSMUST00000175194 63 ntBASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Mir1668-201ENSMUST00000184114 107 ntBASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Gm7213-201ENSMUST00000215977 950 ntBASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ssmem1Q9D9Y8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Gm7977-201ENSMUST00000193787 748 ntBASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssmem1Q9D9Y8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.62□□□□□ -0.07
Ssmem1Q9D9Y8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ssmem1Q9D9Y8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms