Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Gm5408-201ENSMUST00000197998 747 ntBASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp5Q9D7S9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp5Q9D7S9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chmp5Q9D7S9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Gm11249-201ENSMUST00000117071 859 ntBASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Gm8495-201ENSMUST00000188740 694 ntBASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp5Q9D7S9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp5Q9D7S9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chmp5Q9D7S9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp5Q9D7S9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp5Q9D7S9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chmp5Q9D7S9 Gm12896-201ENSMUST00000118430 226 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms