Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm7638-201ENSMUST00000121348 967 ntBASIC18.6■□□□□ 0.57
Cfap53Q9D439 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.6■□□□□ 0.57
Cfap53Q9D439 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.6■□□□□ 0.57
Cfap53Q9D439 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cfap53Q9D439 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cfap53Q9D439 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.59■□□□□ 0.57
Cfap53Q9D439 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cfap53Q9D439 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.58■□□□□ 0.57
Cfap53Q9D439 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap53Q9D439 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap53Q9D439 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap53Q9D439 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cfap53Q9D439 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Mir5122-201ENSMUST00000175004 89 ntBASIC18.58■□□□□ 0.56
Cfap53Q9D439 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.58■□□□□ 0.56
Cfap53Q9D439 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cfap53Q9D439 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.57■□□□□ 0.56
Cfap53Q9D439 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.57■□□□□ 0.56
Cfap53Q9D439 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap53Q9D439 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.56■□□□□ 0.56
Cfap53Q9D439 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Gm3375-201ENSMUST00000203929 796 ntBASIC18.56■□□□□ 0.56
Cfap53Q9D439 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.56■□□□□ 0.56
Cfap53Q9D439 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap53Q9D439 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cfap53Q9D439 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap53Q9D439 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms