Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Mms19Q9D071 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.14■□□□□ 0.49
Mms19Q9D071 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Mms19Q9D071 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Mms19Q9D071 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.13■□□□□ 0.49
Mms19Q9D071 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.13■□□□□ 0.49
Mms19Q9D071 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Mms19Q9D071 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.12■□□□□ 0.49
Mms19Q9D071 Mir5130-201ENSMUST00000175160 84 ntBASIC18.12■□□□□ 0.49
Mms19Q9D071 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Mms19Q9D071 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.12■□□□□ 0.49
Mms19Q9D071 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Mms19Q9D071 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Mms19Q9D071 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Mms19Q9D071 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Gm16061-201ENSMUST00000122167 857 ntBASIC18.11■□□□□ 0.49
Mms19Q9D071 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.11■□□□□ 0.49
Mms19Q9D071 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.11■□□□□ 0.49
Mms19Q9D071 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mms19Q9D071 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Mms19Q9D071 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mms19Q9D071 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Mms19Q9D071 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mms19Q9D071 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mms19Q9D071 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mms19Q9D071 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Mms19Q9D071 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms