Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ssu72Q9CY97 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ssu72Q9CY97 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Gm4974-201ENSMUST00000209974 875 ntBASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Gm4968-201ENSMUST00000071458 858 ntBASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ssu72Q9CY97 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ssu72Q9CY97 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ssu72Q9CY97 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ssu72Q9CY97 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ssu72Q9CY97 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ssu72Q9CY97 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Dio3-201ENSMUST00000097228 1449 ntBASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ssu72Q9CY97 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms