Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.21■□□□□ 0.66
Chd1lQ9CXF7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Gm10033-202ENSMUST00000211874 928 ntBASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Chd1lQ9CXF7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.19■□□□□ 0.66
Chd1lQ9CXF7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Gm10493-201ENSMUST00000097270 612 ntBASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chd1lQ9CXF7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.17■□□□□ 0.66
Chd1lQ9CXF7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chd1lQ9CXF7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.15■□□□□ 0.66
Chd1lQ9CXF7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms