Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retreg3Q9CQV4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.03■□□□□ 0.32
Retreg3Q9CQV4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retreg3Q9CQV4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retreg3Q9CQV4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retreg3Q9CQV4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Gm7367-201ENSMUST00000057611 492 ntBASIC17■□□□□ 0.31
Retreg3Q9CQV4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retreg3Q9CQV4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retreg3Q9CQV4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms