Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.9□□□□□ -0.18
Rer1Q9CQU3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rer1Q9CQU3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rer1Q9CQU3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Gm12527-201ENSMUST00000117967 564 ntBASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Gm43183-201ENSMUST00000200632 547 ntBASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rer1Q9CQU3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.86□□□□□ -0.19
Rer1Q9CQU3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rer1Q9CQU3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms