Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpa3Q9CQ71 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpa3Q9CQ71 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpa3Q9CQ71 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Mir6982-201ENSMUST00000184354 68 ntBASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rpa3Q9CQ71 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpa3Q9CQ71 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rpa3Q9CQ71 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rpa3Q9CQ71 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Gm18958-201ENSMUST00000174258 762 ntBASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpa3Q9CQ71 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms