Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.8■□□□□ 0.28
Trim33Q99PP7 Gm37025-201ENSMUST00000195159 829 ntBASIC16.8■□□□□ 0.28
Trim33Q99PP7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim33Q99PP7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.79■□□□□ 0.28
Trim33Q99PP7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim33Q99PP7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Gm44487-201ENSMUST00000205145 325 ntBASIC16.78■□□□□ 0.28
Trim33Q99PP7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.78■□□□□ 0.28
Trim33Q99PP7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim33Q99PP7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.77■□□□□ 0.28
Trim33Q99PP7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.77■□□□□ 0.28
Trim33Q99PP7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.77■□□□□ 0.28
Trim33Q99PP7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim33Q99PP7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim33Q99PP7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Trim33Q99PP7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms