Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh15Q99PJ1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh15Q99PJ1 Gm11780-201ENSMUST00000136880 516 ntBASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh15Q99PJ1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh15Q99PJ1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Gm8097-201ENSMUST00000117903 829 ntBASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Chchd1-203ENSMUST00000224633 557 ntBASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh15Q99PJ1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh15Q99PJ1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh15Q99PJ1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms