Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.44■□□□□ 0.38
Gtf2ird2Q99NI3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf2ird2Q99NI3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.42■□□□□ 0.38
Gtf2ird2Q99NI3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Gm7213-201ENSMUST00000215977 950 ntBASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf2ird2Q99NI3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf2ird2Q99NI3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.39■□□□□ 0.38
Gtf2ird2Q99NI3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf2ird2Q99NI3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gtf2ird2Q99NI3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gtf2ird2Q99NI3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.39■□□□□ 0.37
Gtf2ird2Q99NI3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms