Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm43514-201ENSMUST00000198852 424 ntBASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm6443-201ENSMUST00000203599 874 ntBASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcd2Q99JR8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd2Q99JR8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Gm18421-201ENSMUST00000204122 625 ntBASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd2Q99JR8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd2Q99JR8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcd2Q99JR8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcd2Q99JR8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd2Q99JR8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcd2Q99JR8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms