Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Thumpd1Q99J36 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Thumpd1Q99J36 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Gm5408-201ENSMUST00000197998 747 ntBASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Rab3c-203ENSMUST00000224180 967 ntBASIC15.12■□□□□ 0.01
Thumpd1Q99J36 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Mtag2-201ENSMUST00000058665 714 ntBASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Thumpd1Q99J36 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Thumpd1Q99J36 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Thumpd1Q99J36 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms