Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gm6659-201ENSMUST00000174752 547 ntBASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha2Q91Y17 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gm27389-201ENSMUST00000183622 195 ntBASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdha2Q91Y17 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdha2Q91Y17 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdha2Q91Y17 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pcdha2Q91Y17 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdha2Q91Y17 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Gm44450-201ENSMUST00000199528 114 ntBASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Gm18115-201ENSMUST00000221209 621 ntBASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms