Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhb2Q91Y00 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhb2Q91Y00 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhb2Q91Y00 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.02■□□□□ 0.47
Pcdhb2Q91Y00 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Pcdhb2Q91Y00 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Gm18101-201ENSMUST00000215769 548 ntBASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Gm7370-201ENSMUST00000219471 767 ntBASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhb2Q91Y00 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Gm22697-201ENSMUST00000175194 63 ntBASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhb2Q91Y00 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Gm10013-201ENSMUST00000106074 672 ntBASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb2Q91Y00 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Gm7977-201ENSMUST00000193787 748 ntBASIC17.98■□□□□ 0.47
Pcdhb2Q91Y00 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms