Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb6Q91XZ4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Gm18958-201ENSMUST00000174258 762 ntBASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb6Q91XZ4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb6Q91XZ4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
Pcdhb6Q91XZ4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhb6Q91XZ4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb6Q91XZ4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb6Q91XZ4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms