Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhga3Q91XY5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Gm27011-201ENSMUST00000182352 972 ntBASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Gm10517-202ENSMUST00000192970 758 ntBASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhga3Q91XY5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Gm22240-201ENSMUST00000175225 82 ntBASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhga3Q91XY5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga3Q91XY5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhga3Q91XY5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhga3Q91XY5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.08■□□□□ 0.01
Pcdhga3Q91XY5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdhga3Q91XY5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhga3Q91XY5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Pcdhga3Q91XY5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhga3Q91XY5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms