Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga9Q91XX9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga9Q91XX9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga9Q91XX9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga9Q91XX9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga9Q91XX9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga9Q91XX9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga9Q91XX9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.77■□□□□ 0.27
Pcdhga9Q91XX9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga9Q91XX9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga9Q91XX9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms