Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.42■□□□□ 0.7
Trex1Q91XB0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.41■□□□□ 0.7
Trex1Q91XB0 Birc2-201ENSMUST00000054878 378 ntBASIC19.41■□□□□ 0.7
Trex1Q91XB0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trex1Q91XB0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.4■□□□□ 0.7
Trex1Q91XB0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.4■□□□□ 0.7
Trex1Q91XB0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trex1Q91XB0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trex1Q91XB0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Gm12895-201ENSMUST00000122214 226 ntBASIC19.39■□□□□ 0.69
Trex1Q91XB0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.39■□□□□ 0.69
Trex1Q91XB0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trex1Q91XB0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.38■□□□□ 0.69
Trex1Q91XB0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.38■□□□□ 0.69
Trex1Q91XB0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Trex1Q91XB0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trex1Q91XB0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms