Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Gm29518-201ENSMUST00000190858 372 ntBASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Gm21362-201ENSMUST00000194272 928 ntBASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d19Q91X43 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d19Q91X43 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Sh3d19Q91X43 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.64■□□□□ 0.42
Sh3d19Q91X43 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Phf7-203ENSMUST00000226565 1971 ntBASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d19Q91X43 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Gm17808-201ENSMUST00000200859 894 ntBASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3d19Q91X43 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.63■□□□□ 0.41
Sh3d19Q91X43 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.62■□□□□ 0.41
Sh3d19Q91X43 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d19Q91X43 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d19Q91X43 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3d19Q91X43 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms