Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Gm28877-201ENSMUST00000191349 604 ntBASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Gm2594-201ENSMUST00000214774 742 ntBASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb17Q91VD8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb17Q91VD8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb17Q91VD8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb17Q91VD8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb17Q91VD8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb17Q91VD8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms