Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.28■□□□□ 0.84
StrcQ8VIM6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
StrcQ8VIM6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Gm6089-201ENSMUST00000197666 938 ntBASIC20.27■□□□□ 0.84
StrcQ8VIM6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
StrcQ8VIM6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
StrcQ8VIM6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.26■□□□□ 0.83
StrcQ8VIM6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.26■□□□□ 0.83
StrcQ8VIM6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrcQ8VIM6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Gm11780-201ENSMUST00000136880 516 ntBASIC20.25■□□□□ 0.83
StrcQ8VIM6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.25■□□□□ 0.83
StrcQ8VIM6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.25■□□□□ 0.83
StrcQ8VIM6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.24■□□□□ 0.83
StrcQ8VIM6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.24■□□□□ 0.83
StrcQ8VIM6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
StrcQ8VIM6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.23■□□□□ 0.83
StrcQ8VIM6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.23■□□□□ 0.83
StrcQ8VIM6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrcQ8VIM6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
StrcQ8VIM6 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.22■□□□□ 0.83
StrcQ8VIM6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrcQ8VIM6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.21■□□□□ 0.83
StrcQ8VIM6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.21■□□□□ 0.83
StrcQ8VIM6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
StrcQ8VIM6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.2■□□□□ 0.82
StrcQ8VIM6 Chchd1-203ENSMUST00000224633 557 ntBASIC20.2■□□□□ 0.82
StrcQ8VIM6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
StrcQ8VIM6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrcQ8VIM6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms