Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.03■□□□□ 0.48
TraipQ8VIG6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TraipQ8VIG6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Mir3081-201ENSMUST00000175305 84 ntBASIC18.02■□□□□ 0.48
TraipQ8VIG6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TraipQ8VIG6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TraipQ8VIG6 Grk6-206ENSMUST00000224995 2971 ntBASIC18.02■□□□□ 0.47
TraipQ8VIG6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.02■□□□□ 0.47
TraipQ8VIG6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TraipQ8VIG6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TraipQ8VIG6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TraipQ8VIG6 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.01■□□□□ 0.47
TraipQ8VIG6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TraipQ8VIG6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Olfr129-201ENSMUST00000122318 993 ntBASIC18■□□□□ 0.47
TraipQ8VIG6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Gm17971-201ENSMUST00000190239 806 ntBASIC18■□□□□ 0.47
TraipQ8VIG6 AC125350.1-201ENSMUST00000225115 903 ntBASIC18■□□□□ 0.47
TraipQ8VIG6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TraipQ8VIG6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TraipQ8VIG6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TraipQ8VIG6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Gm27741-201ENSMUST00000185060 237 ntBASIC17.99■□□□□ 0.47
TraipQ8VIG6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.99■□□□□ 0.47
TraipQ8VIG6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TraipQ8VIG6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms