Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cspg4Q8VHY0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Gm7862-201ENSMUST00000121461 292 ntBASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cspg4Q8VHY0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cspg4Q8VHY0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Gm27397-201ENSMUST00000184997 107 ntBASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cspg4Q8VHY0 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.53□□□□□ -0.08
Cspg4Q8VHY0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cspg4Q8VHY0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms