Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm1Q8VC85 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm1Q8VC85 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Gm10698-201ENSMUST00000182663 604 ntBASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm1Q8VC85 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Gm15378-201ENSMUST00000121894 207 ntBASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lsm1Q8VC85 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lsm1Q8VC85 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.23■□□□□ 0.19
Lsm1Q8VC85 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lsm1Q8VC85 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms