Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpap2Q8VC34 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpap2Q8VC34 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Gm16061-201ENSMUST00000122167 857 ntBASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Gm13474-201ENSMUST00000122466 815 ntBASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpap2Q8VC34 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Rpap2Q8VC34 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rpap2Q8VC34 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpap2Q8VC34 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpap2Q8VC34 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms