Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.49■□□□□ 0.39
Sh3kbp1Q8R550 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Gm7638-201ENSMUST00000121348 967 ntBASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Gm24841-201ENSMUST00000158676 357 ntBASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sh3kbp1Q8R550 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.47■□□□□ 0.39
Sh3kbp1Q8R550 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Gm22697-201ENSMUST00000175194 63 ntBASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Gm7791-201ENSMUST00000219066 539 ntBASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3kbp1Q8R550 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3kbp1Q8R550 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms