Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.66■□□□□ 0.26
Chrna3Q8R4G9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.65■□□□□ 0.26
Chrna3Q8R4G9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chrna3Q8R4G9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chrna3Q8R4G9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chrna3Q8R4G9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chrna3Q8R4G9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chrna3Q8R4G9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chrna3Q8R4G9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms