Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 CT030185.2-201ENSMUST00000222614 1310 ntBASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 AC116589.4-201ENSMUST00000222390 216 ntBASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cacnb1Q8R3Z5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacnb1Q8R3Z5 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 AC154245.1-201ENSMUST00000224615 601 ntBASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacnb1Q8R3Z5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Timm23-208ENSMUST00000226683 750 ntBASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacnb1Q8R3Z5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Gm3375-201ENSMUST00000203929 796 ntBASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Gm5417-201ENSMUST00000079706 384 ntBASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacnb1Q8R3Z5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacnb1Q8R3Z5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Cacnb1Q8R3Z5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cacnb1Q8R3Z5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms