Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slf1Q8R3P9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Gm27405-201ENSMUST00000184201 112 ntBASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.17■□□□□ 0.34
Slf1Q8R3P9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slf1Q8R3P9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.16■□□□□ 0.34
Slf1Q8R3P9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.16■□□□□ 0.34
Slf1Q8R3P9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slf1Q8R3P9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slf1Q8R3P9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.14■□□□□ 0.34
Slf1Q8R3P9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slf1Q8R3P9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slf1Q8R3P9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms