Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nudcd3Q8R1N4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Gm11643-201ENSMUST00000119578 864 ntBASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nudcd3Q8R1N4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nudcd3Q8R1N4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nudcd3Q8R1N4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nudcd3Q8R1N4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nudcd3Q8R1N4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nudcd3Q8R1N4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Nudcd3Q8R1N4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Mir6349-201ENSMUST00000184059 97 ntBASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms