Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Gm17807-201ENSMUST00000186869 298 ntBASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Zcchc9Q8R1J3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Zcchc9Q8R1J3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Zcchc9Q8R1J3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Zcchc9Q8R1J3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Gm11355-201ENSMUST00000121120 306 ntBASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Gm7461-201ENSMUST00000058918 827 ntBASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Zcchc9Q8R1J3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Zcchc9Q8R1J3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Zcchc9Q8R1J3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms