Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Gm13216-201ENSMUST00000117145 591 ntBASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Gm27463-201ENSMUST00000183569 57 ntBASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atf7Q8R0S1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20■□□□□ 0.79
Atf7Q8R0S1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20■□□□□ 0.79
Atf7Q8R0S1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Atf7Q8R0S1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20■□□□□ 0.79
Atf7Q8R0S1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Gm9484-201ENSMUST00000195892 1159 ntBASIC20■□□□□ 0.79
Atf7Q8R0S1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20■□□□□ 0.79
Atf7Q8R0S1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20■□□□□ 0.79
Atf7Q8R0S1 Gm5417-201ENSMUST00000079706 384 ntBASIC20■□□□□ 0.79
Atf7Q8R0S1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Atf7Q8R0S1 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.99■□□□□ 0.79
Atf7Q8R0S1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.99■□□□□ 0.79
Atf7Q8R0S1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atf7Q8R0S1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.97■□□□□ 0.79
Atf7Q8R0S1 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atf7Q8R0S1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Atf7Q8R0S1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms