Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ddx54Q8K4L0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm14057-201ENSMUST00000120631 482 ntBASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm5186-201ENSMUST00000218781 920 ntBASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx54Q8K4L0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 AC151286.1-201ENSMUST00000198489 145 ntBASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx54Q8K4L0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx54Q8K4L0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Gm25745-201ENSMUST00000174945 133 ntBASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx54Q8K4L0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Gm4535-201ENSMUST00000182274 558 ntBASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Gm10355-201ENSMUST00000097146 517 ntBASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx54Q8K4L0 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.14■■□□□ 1.14
Ddx54Q8K4L0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ddx54Q8K4L0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ddx54Q8K4L0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms